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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937916.1_cds_XP_016482973.1_74138
CDS Infomation

[gene=LOC107803724] [db_xref=GeneID:107803724] [protein=xylose isomerase-like] [protein_id=XP_016482973.1] [location=complement(join(39604..39639,40124..40201,40290..40361,40462..40561,40702..40742,40852..40922,41036..41115,41225..41276,41399..41454,41534..41579,41756..41807,42647..42748,42852..42906,42989..43065,43245..43295,43448..43539,43635..43764,43842..43916,44029..44139,44419..44487))] [gbkey=CDS]
Sequence

ATGATAGAAAGGAATCTTGGAAAATGTTTGTTGCTCCTTCTTTGTTTAAATGTTGTCTCA
AATATAGTGACCGCTGCTGCTCCACCAACTTGTCCTGCTGATATTGGTAGTGATTGTGGA
GGTGATTCGGGTGAATGGGAAGGGGAGTTCTTCCCTGGAATTCCAAAAATTAAGTATGAG
GGGCCATCTAGTAAGAATCCGCTTTCCTTTAAATGGTACAATGCCGAGGAGGAGATTCTT
GGCAAAAAGATGAAGGATTGGATGCGATTTAGCGTTGCGTTCTGGCATACGTTCCGTGGC
ACAGGAGCTGATCCATTTGGTGCTCCTACAAAGTTGTGGCCGTGGGAAGATGGTACCAAT
TCCCTGGCTATGGCCAAGAGAAGATTGAGAGCAAACTTTGAGTTCCTGGAGAAACTTGGA
GTAGATAGATGGTGTTTCCATGATCGGGACATTGCTCCCGAGGGCAAAACCCTTGAGGAA
ACAAATGCAAACTTGGATGAAGTGGTGGCTCTTGCCAAAGAGCTTCAGGGAAATAAAATT
CATCTTTTGTGGGGTACCGCTCAGTTGTTCCTCCAACCTCGGTACATGCATGGTGCTGCT
ACTAGCCCTGAATTAGGTGTATATGCATATGCTGCTGCTCAGGTCAAGAAAGCTCTGGAG
GTTACACATTATCTCGGGGGAGAAAATTATGTCTTTTGGGGTGGTCGAGAAGGTTACCAG
AGCCTCCTAAACACAGATATGGAAAGAGAGCTTGACCATATGGCAAGATTCATGGAAACT
GCTGTTGCTTACAAAAAGAAGATTGGCTTCAATGGAACATTACTAATTGAACCAAAGCCT
CAGGAGCCAACAAAACACCAGTATGACTGGGATGCTGCAACATCTGCTAATTTCTTACGC
AAATATGGACTTATAGGAGAGTTCAAATTAAACATAGAGTGCAACCATGCCACTTTGGCT
GGTCATAGTTGTCATCATGAGCTTGAAACAGCAAGAATTAATGGTTTGCTTGGTAACATT
GACGCAAATACTGGCGATCCCCAAGTCGGTTGGGACACAGATCAATTTTTGATGGATGTC
GCTGAAGCAACACTAGTGATGCAAACCGTTATTAAAAATGGAGGATTGGCACCAGGAGGA
TTCAACTTTGATGCAAAACTGCGGAGGGAGAGCACTGATGTTGAAGACCTATTTATTGCT
CACATTGCCGGTATGGACACTTTGGCCCGTGGCCTAAGAAATGCTGCCAAGCTAATTGAG
GATGGCTCCTTGAGTGAGCTTGTTAAAAAGAGATATCAGAGTTTTGACACAGAGCTTGGT
GCTGCAATTGAGGCTGGGAAGGCTGACTTTGAACTGCTCGAGAAGAAGGCGTTAGAATGG
GGAGAACCTAAAGTTCCTTCTGGAAAGCAGGAACTTGCGGAGATGATTTTTCAGTCAGCA
TTGTAG

Peptide Sequence

PEP ID

XP_016482973.1
PEP Infomation

PREDICTED: xylose isomerase-like [Nicotiana tabacum]
Sequence

MIERNLGKCLLLLLCLNVVSNIVTAAAPPTCPADIGSDCGGDSGEWEGEFFPGIPKIKYE
GPSSKNPLSFKWYNAEEEILGKKMKDWMRFSVAFWHTFRGTGADPFGAPTKLWPWEDGTN
SLAMAKRRLRANFEFLEKLGVDRWCFHDRDIAPEGKTLEETNANLDEVVALAKELQGNKI
HLLWGTAQLFLQPRYMHGAATSPELGVYAYAAAQVKKALEVTHYLGGENYVFWGGREGYQ
SLLNTDMERELDHMARFMETAVAYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATSANFLR
KYGLIGEFKLNIECNHATLAGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLMDV
AEATLVMQTVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIAGMDTLARGLRNAAKLIE
DGSLSELVKKRYQSFDTELGAAIEAGKADFELLEKKALEWGEPKVPSGKQELAEMIFQSA
L

Transcript Sequence

Gene sequence data has not been registered.